Gram-negative bacteria
| Gram-positive bacteria
| fungi |
| Acinetobacter johnsonii | Bacillus spp.
| Candida albicans (tooth swab/blood)
|
| Acinetobacter lwoffii | Clostridium spp.
| Candida parapsilosis |
| Aeromonas veronii | Clostridium hatheway/lavalense | Candida tropicalis |
Bacteroides fragilis (heart prothesis)
| Corynebacterium accolens (pus stenum) | Cladosporium cladosporioides (liquor) |
| Dialister invisus (tooth swab) | Corynebacterium jeikeium | Malassezia spp. (liquor/drainage) |
| Edwardsiella tarda | Corynebacterium tuberculostearicum (homograft)
| |
| Escherichia coli | Enterococcus casseliflavus | |
| Haemophilus influenzae (tooth swab) | Enterococcus faecalis | |
| Klebsiella pneumoniae | Gemella spp. | |
| Leptotrichia spp. | Granulicatella adiacens (tooth swab) | |
| Moraxella morganii | Lactobacillus spp. | |
| Neoehrlichia mikurensis (Candidatus) | Listeria monocytogenes | |
| Parabacteroides distasonis | Micrococcus spp. | |
| Petrobacter spp. | Mycobacterium salmoniphilum (synovial) | |
| Proteus mirabilis | Propionibacterium acnes | |
| Proteus vulgaris | Rothia mucilaginosa | |
| Pseudomonas aeruginosa (synovial/blood) | Rothia dentocariosa (pus stenum, tooth swab) | |
| Pseudomonas fulva | Ruminococcus productus | |
| Raoultella planticola | Staphylococcus aureus | |
| Serratia spp. | Staphylococcus epidermidis (heart prothesis, blood) | |
| Sphingomonas spp. | Staphylococcus warneri (O2 exchange membrane in ECMO patient) | |
Stenotrophomonas maltophilia (heart valve/blood)
| Streptococcus bovis (heart valve) | |
Veillonella spp.
| Streptococcus dysgalactiae subsp. equisimilis (pus synovial) | |
| | Streptococcus gallolyticus (heart valve) | |
| | Streptococcus gordonii (heart valve) | |
| | Streptococcus mitis (pus stenum/tooth swab) | |
| | Streptococcus oralis | |
| | Streptococcus parasanguinis | |
| | Streptococcus pneumoniae | |
| | Streptococcus pyogenes (synovial) | |
| | Streptococcus salivarius (heart valve) | |
| | Streptococcus sanguinis
| |